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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17977985_17986683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17977985 - 17986683

Intron Length:

8699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATCTA

5'SS Class:

strong_major

3'SS Sequence:

TGCATTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

AACCTATTAACA

Flanking Amino Acid:

ALPPGSYASLGRIRTRRQSS

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

80.4

34.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

75.4

0.57

0.9

40.8

Minor 5ss

37.2

-1.5

3.1

49.8

46.4

Minor BPS

54.3

0.13

1.6

61.54

37.9

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656