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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17986855_17988121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17986855 - 17988121

Intron Length:

1267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCATCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TCTTCCTTATTC

Flanking Amino Acid:

RSPTGSTTSRASTVSTKSVS

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

0.82

0.8

24.9

Major PPT

75.9

0.58

0.8

69.3

30.1

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

72.1

0.67

1.5

77.93

38.5

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211