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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17989093_17990858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17989093 - 17990858

Intron Length:

1766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

GCCTTGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAC

U12 Branch Point Sequence:

GAAATATTACTA

Flanking Amino Acid:

ADSEARIEARKCYWGFHSHF

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.8

33.6

Major BPS

0.4

1.1

57.8

38.6

Major PPT

77.5

0.62

0.9

68.2

42.3

Minor 5ss

36.8

-1.5

2.7

42.7

38.3

Minor BPS

43.4

-0.5

1.7

47.92

35.6

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036448

17912881 - 18048536

135656

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656