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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17992700_17993439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17992700 - 17993439

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

CCTTTTGTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TTTTCCTGTTTT

Flanking Amino Acid:

GVVAVRLIIRHTHIPRLIPI

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

74.4

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

79.7

0.67

0.8

72.6

37.6

Minor 5ss

37.3

-1.4

2.6

40.4

39.1

Minor BPS

43.6

-0.4

3.6

80.68

41.2

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656

ENSAPLT00000030590

17911881 - 18048536

136656