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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17994365_17995580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17994365 - 17995580

Intron Length:

1216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

ATGGTGCTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTAACAGTCACT

Flanking Amino Acid:

KHDWEQRVSALKKIRSLLLA

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

71.2

40.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

62.1

0.27

1.1

55.1

44.2

Minor 5ss

34.9

-1.7

2.9

52.3

44.3

Minor BPS

-0.3

2.6

70.89

45.4

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656