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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17996549_17997522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17996549 - 17997522

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCTGA

5'SS Class:

major

3'SS Sequence:

ATATGCATGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATATGC

Flanking Amino Acid:

GSAPLGSKSSTAKEGAGAVD

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

68.7

39.1

Major BPS

100

1.24

0.5

100

Major PPT

62.4

0.28

1.1

59.8

45.2

Minor 5ss

44.9

-0.5

2.8

55.7

43.1

Minor BPS

49.4

-0

2.1

70.61

40.9

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656