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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18029002_18030667_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18029002 - 18030667

Intron Length:

1666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGTT

5'SS Class:

strong_major

3'SS Sequence:

ATCCGATGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TCCCTCCTATCC

Flanking Amino Acid:

CNLLGDPNSQVRDAAINSLV

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

81.3

32.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

66.2

0.36

62.1

42.9

Minor 5ss

36.8

-1.5

3.5

49.2

Minor BPS

-0.3

1.9

55.69

42.7

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656