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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18030922_18031319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18030922 - 18031319

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCCTG

5'SS Class:

major

3'SS Sequence:

TTGTCTTCCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CATGTCTCACCT

Flanking Amino Acid:

KIMDQAANPQYVWDRMLGGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

63.8

47.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

81.3

0.71

0.8

77.1

31.6

Minor 5ss

40.4

-1.1

3.3

55.9

48.3

Minor BPS

47.2

-0.1

1.9

64.43

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656