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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18031424_18031602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18031424 - 18031602

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CCTTCTGAGAGG

Flanking Amino Acid:

QDRFKAQIGTVLPSLLDRLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

79.5

0.66

0.8

73.2

31.7

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

37.3

-1.1

2.4

40.81

44.7

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656

ENSAPLT00000030590

17911881 - 18048536

136656