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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18031682_18048061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18031682 - 18048061

Intron Length:

16380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CGTGGCTGAGCC

Flanking Amino Acid:

TSWVNSSNYKVVLLGIDILS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

76.1

0.59

0.9

68.8

37.1

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

42.5

-0.5

2.1

51.68

45.2

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656