Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_18067134_18068720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18067134 - 18068720

Intron Length:

1587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

AAGCACTGAATG

Flanking Amino Acid:

GVHQGGGFQHIPKKCQKARE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

63.3

0.33

1.2

39.8

Major PPT

85.9

0.81

0.8

77.4

36.9

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

46.5

-0.4

1.6

46.9

39.5

Associated Gene:

Gene:

TSN

Ensembl Gene ID:

ENSAPLG00000030910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036844

18066887 - 18070981

4095