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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18070400_18070744_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18070400 - 18070744

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

ATCCCTCTGATG

Flanking Amino Acid:

SGVLTLASELARLAVNSVTA

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

0.72

38.9

Major PPT

77.3

0.61

0.7

25.1

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

46.5

-0.4

1.7

50.54

37.9

Associated Gene:

Gene:

TSN

Ensembl Gene ID:

ENSAPLG00000030910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036844

18066887 - 18070981

4095