Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_18121605_18125475_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18121605 - 18125475

Intron Length:

3871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAGC

5'SS Class:

major

3'SS Sequence:

TTGTGTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAATCATTAATG

Flanking Amino Acid:

QAVTILQRSFRAKREQERQH

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.5

41.5

Major BPS

80.4

0.76

80.3

31.8

Major PPT

79.9

0.67

0.9

74.1

40.3

Minor 5ss

39.1

-1.2

52.1

44.7

Minor BPS

64.9

0.33

1.7

67.11

40.2

Associated Gene:

Gene:

IQCB1

Ensembl Gene ID:

ENSAPLG00000002873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002919

18118267 - 18136458

18192