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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18126827_18129477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18126827 - 18129477

Intron Length:

2651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTCTCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TTTGCCTTAGCT

Flanking Amino Acid:

LLNLLTTRYKGLKVLLSKQW

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

77.1

32.8

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

81.7

0.71

0.7

24.1

Minor 5ss

37.5

-1.4

2.4

42.6

44.3

Minor BPS

75.4

0.88

1.6

37.4

Associated Gene:

Gene:

IQCB1

Ensembl Gene ID:

ENSAPLG00000002873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002919

18118267 - 18136458

18192