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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18275750_18275948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18275750 - 18275948

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

GGTGTTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTCCTTTTAACA

Flanking Amino Acid:

DEDIWLNPTEVEATSHEINL

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

84.4

33.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

71.8

0.49

0.9

69.4

41.7

Minor 5ss

-0.9

2.9

58.6

45.7

Minor BPS

64.9

0.46

1.3

67.58

39.4

Associated Gene:

Gene:

HSPBAP1

Ensembl Gene ID:

ENSAPLG00000003995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020576

18275198 - 18300636

25439

ENSAPLT00000047816

18275198 - 18303682

28485

ENSAPLT00000004093

18275198 - 18300780

25583

ENSAPLT00000044754

18275198 - 18300835

25638

ENSAPLT00000028544

18275198 - 18303082

27885

ENSAPLT00000022561

18274709 - 18304047

29339