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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18276060_18279249_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18276060 - 18279249

Intron Length:

3190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATTTTCC

5'SS Class:

major

3'SS Sequence:

TCCCTTGAGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ATTCCCTTGAGG

Flanking Amino Acid:

TISINSWIELDADHEARVEE

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

63.1

35.9

Major BPS

78.6

0.71

79.6

32.9

Major PPT

63.7

0.31

1.1

60.9

39.3

Minor 5ss

47.8

-0.2

2.3

59.6

Minor BPS

60.9

0.2

1.7

66.62

Associated Gene:

Gene:

HSPBAP1

Ensembl Gene ID:

ENSAPLG00000003995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020576

18275198 - 18300636

25439

ENSAPLT00000047816

18275198 - 18303682

28485

ENSAPLT00000004093

18275198 - 18300780

25583

ENSAPLT00000044754

18275198 - 18300835

25638

ENSAPLT00000028544

18275198 - 18303082

27885

ENSAPLT00000022561

18274709 - 18304047

29339