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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18279334_18286235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18279334 - 18286235

Intron Length:

6902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCATTC

5'SS Class:

major

3'SS Sequence:

CTCTGATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTGTCTCTGATT

Flanking Amino Acid:

AHVVTLSPGQVLLVPRHWWH

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.2

67.1

39.7

Major BPS

0.72

38.9

Major PPT

78.4

0.64

0.9

69.1

40.9

Minor 5ss

-0.3

3.1

68.2

42.8

Minor BPS

0.43

1.6

79.25

37.5

Associated Gene:

Gene:

HSPBAP1

Ensembl Gene ID:

ENSAPLG00000003995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022561

18274709 - 18304047

29339

ENSAPLT00000004093

18275198 - 18300780

25583

ENSAPLT00000047816

18275198 - 18303682

28485

ENSAPLT00000044754

18275198 - 18300835

25638

ENSAPLT00000028544

18275198 - 18303082

27885