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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18286408_18289255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18286408 - 18289255

Intron Length:

2848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACATTTTTATCT

Flanking Amino Acid:

GCNLVLQVQGRKKWHLFPPG

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

80.7

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.1

0.83

0.7

84.7

28.8

Minor 5ss

40.7

-1

57.6

46.6

Minor BPS

0.33

1.6

70.23

41.2

Associated Gene:

Gene:

HSPBAP1

Ensembl Gene ID:

ENSAPLG00000003995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020576

18275198 - 18300636

25439

ENSAPLT00000047816

18275198 - 18303682

28485

ENSAPLT00000004093

18275198 - 18300780

25583

ENSAPLT00000044754

18275198 - 18300835

25638

ENSAPLT00000028544

18275198 - 18303082

27885

ENSAPLT00000022561

18274709 - 18304047

29339