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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18289393_18293203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18289393 - 18293203

Intron Length:

3811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTACATAAACA

Flanking Amino Acid:

IFEDKAEIFQDIRWSDFGFP

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.5

0.64

0.9

36.6

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

53.1

0.09

69.25

42.8

Associated Gene:

Gene:

HSPBAP1

Ensembl Gene ID:

ENSAPLG00000003995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047816

18275198 - 18303682

28485

ENSAPLT00000022561

18274709 - 18304047

29339