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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18293389_18299020_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18293389 - 18299020

Intron Length:

5632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TGCTCATGTAGT

Flanking Amino Acid:

FRIGSKTMDLVPQFETRCSY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

71.5

40.2

Major BPS

79.7

0.74

79.6

35.6

Major PPT

77.6

0.62

0.9

70.2

41.3

Minor 5ss

30.1

-2.3

3.1

38.3

46.6

Minor BPS

43.1

-0.4

2.2

62.92

46.4

Associated Gene:

Gene:

HSPBAP1

Ensembl Gene ID:

ENSAPLG00000003995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020576

18275198 - 18300636

25439

ENSAPLT00000047816

18275198 - 18303682

28485

ENSAPLT00000004093

18275198 - 18300780

25583

ENSAPLT00000044754

18275198 - 18300835

25638

ENSAPLT00000028544

18275198 - 18303082

27885

ENSAPLT00000022561

18274709 - 18304047

29339