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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18326337_18337227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18326337 - 18337227

Intron Length:

10891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TCATCTCTATTC

Flanking Amino Acid:

VPVSDLEIRKKLIHGGQLLN

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

84.1

0.77

0.8

76.4

37.7

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

48.1

-0.1

1.9

59.36

40.3

Associated Gene:

Gene:

SLC49A4

Ensembl Gene ID:

ENSAPLG00000004155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033021

18310545 - 18367626

57082

ENSAPLT00000030270

18310404 - 18367626

57223

ENSAPLT00000023486

18310439 - 18367626

57188

ENSAPLT00000004274

18307522 - 18364119

56598