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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18337497_18343226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18337497 - 18343226

Intron Length:

5730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TGTTCTCTGATT

Flanking Amino Acid:

KDRIEAVLYAEFGMVSLIFS

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

81.9

26.3

Major BPS

0.72

38.9

Major PPT

72.9

0.52

0.9

72.1

32.5

Minor 5ss

44.4

-0.6

2.7

57.6

47.1

Minor BPS

62.1

0.46

1.6

80.42

35.4

Associated Gene:

Gene:

SLC49A4

Ensembl Gene ID:

ENSAPLG00000004155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033021

18310545 - 18367626

57082

ENSAPLT00000030270

18310404 - 18367626

57223

ENSAPLT00000023486

18310439 - 18367626

57188

ENSAPLT00000004274

18307522 - 18364119

56598