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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18353794_18363922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18353794 - 18363922

Intron Length:

10129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGACA

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TTTCTCTTACAG

Flanking Amino Acid:

TSVTHLPLTTATLYTSCILL

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

65.3

40.2

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

86.5

0.82

0.8

80.4

31.7

Minor 5ss

31.5

-2.1

3.2

41.3

44.7

Minor BPS

55.6

0.04

1.8

65.72

41.9

Associated Gene:

Gene:

SLC49A4

Ensembl Gene ID:

ENSAPLG00000004155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004274

18307522 - 18364119

56598

ENSAPLT00000033021

18310545 - 18367626

57082

ENSAPLT00000030270

18310404 - 18367626

57223

ENSAPLT00000023486

18310439 - 18367626

57188