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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18364106_18367510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18364106 - 18367510

Intron Length:

3405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGGAT

U12 Branch Point Sequence:

TTCTGCTTTACA

Flanking Amino Acid:

LLFFLTFYHTEFSWFNWCLP

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

53.7

0.09

1.6

57.1

49.4

Major PPT

85.6

0.8

79.6

32.5

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

60.1

0.31

2.1

75.21

42.3

Associated Gene:

Gene:

SLC49A4

Ensembl Gene ID:

ENSAPLG00000004155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033021

18310545 - 18367626

57082

ENSAPLT00000030270

18310404 - 18367626

57223

ENSAPLT00000023486

18310439 - 18367626

57188