Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_183980_184468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

183980 - 184468

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCATGCCCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TTCCCCTCCATG

Flanking Amino Acid:

PKRSNKMAELASELAQTPGQ

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

80.5

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

69.7

0.44

0.9

61.3

34.9

Minor 5ss

56.3

0.21

2.4

44.2

Minor BPS

47.5

-0.3

56.83

Associated Gene:

Gene:

FAM126B

Ensembl Gene ID:

ENSAPLG00000015610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036696

122670 - 198917

76248

ENSAPLT00000016309

182547 - 198206

15660

ENSAPLT00000016176

122670 - 198917

76248