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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18399372_18402489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18399372 - 18402489

Intron Length:

3118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATAC

5'SS Class:

strong_major

3'SS Sequence:

CATTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TGTTCTTTAAAA

Flanking Amino Acid:

SSIDESTNCGGFSLIHLIAT

Intron Amino Acid Position:

893

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.1

34.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

80.3

0.68

0.8

73.6

Minor 5ss

36.8

-1.5

3.3

49.4

47.1

Minor BPS

76.8

0.84

1.3

81.56

33.1

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048529

18394448 - 18454621

60174

ENSAPLT00000004964

18382268 - 18496095

113828