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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18402535_18403443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18402535 - 18403443

Intron Length:

909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTGTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAC

U12 Branch Point Sequence:

CTTTCTCCAATA

Flanking Amino Acid:

YQDCLYNEIPVILPASSIDE

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

82.4

29.9

Major BPS

58.2

0.2

49.5

35.1

Major PPT

80.3

0.68

0.8

80.5

31.5

Minor 5ss

42.1

-0.9

2.4

52.1

44.5

Minor BPS

0.06

1.9

67.95

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048529

18394448 - 18454621

60174

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828