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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18403594_18404508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18403594 - 18404508

Intron Length:

915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCCAGT

5'SS Class:

major

3'SS Sequence:

TCTTGGATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTTTCCTTATCT

Flanking Amino Acid:

EALCNTHPCEGGWSEWSEWS

Intron Amino Acid Position:

828

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.3

63.6

48.1

Major BPS

78.8

0.72

67.9

40.1

Major PPT

66.2

0.36

1.1

68.4

41.3

Minor 5ss

45.3

-0.5

3.1

66.5

44.6

Minor BPS

85.6

1.19

1.4

100.1

28.3

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828