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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18406609_18407240_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18406609 - 18407240

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTATGTATT

5'SS Class:

weak_major

3'SS Sequence:

GTTTTCCTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

TTTTCCTTGAAG

Flanking Amino Acid:

NDGSAVCDTDSLVDDLLKTG

Intron Amino Acid Position:

730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

76.8

37.9

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

75.6

0.58

76.1

32.9

Minor 5ss

52.4

0.08

2.5

78.4

35.5

Minor BPS

76.7

0.7

1.4

80.13

35.6

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004964

18382268 - 18496095

113828

ENSAPLT00000048529

18394448 - 18454621

60174

ENSAPLT00000037293

18402215 - 18499533

97319