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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18407467_18408849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18407467 - 18408849

Intron Length:

1383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTTTGATAAGTA

Flanking Amino Acid:

NGNTCPGCAVEYKTCNPESC

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

76.2

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

78.5

0.64

0.9

32.5

Minor 5ss

43.7

-0.7

2.6

56.9

42.5

Minor BPS

41.3

-0.6

2.3

57.01

42.6

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828

ENSAPLT00000048529

18394448 - 18454621

60174