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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18408998_18410517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18408998 - 18410517

Intron Length:

1520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATTAT

U12 Branch Point Sequence:

TGGACATTATTT

Flanking Amino Acid:

RVCVGQSREERFCNENSPCP

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

63.3

0.33

1.1

41.2

Major PPT

93.7

0.98

0.6

92.5

17.4

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

48.7

-0

1.9

66.81

43.8

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828

ENSAPLT00000048529

18394448 - 18454621

60174