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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18410662_18413744_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18410662 - 18413744

Intron Length:

3083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTCGG

5'SS Class:

major

3'SS Sequence:

CAAACTATGTTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TCTCTCTCAAAC

Flanking Amino Acid:

GARIEVANCSRNGAWTPWSS

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.2

56.2

48.1

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

53.7

0.09

1.1

51.7

Minor 5ss

45.2

-0.5

2.6

59.1

45.4

Minor BPS

54.4

0.12

1.7

65.16

40.1

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828

ENSAPLT00000048529

18394448 - 18454621

60174