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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18413927_18420261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18413927 - 18420261

Intron Length:

6335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTTTAAACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

LWTQNITECPVKNLTTNGRL

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

66.5

39.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.52

68.9

Minor 5ss

34.2

-1.8

3.2

45.7

43.5

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828

ENSAPLT00000048529

18394448 - 18454621

60174