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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18420380_18435240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18420380 - 18435240

Intron Length:

14861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCACATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AGAGCTTTAATC

Flanking Amino Acid:

LERCSMYRTEGECLGARDPY

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

73.8

0.54

67.4

38.4

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

60.7

0.32

1.4

62.09

37.6

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048529

18394448 - 18454621

60174

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828