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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18437841_18441236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18437841 - 18441236

Intron Length:

3396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCTA

5'SS Class:

major

3'SS Sequence:

CTTCCATGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

TGAAGTTCAATC

Flanking Amino Acid:

PTLNPIPNFQCGTLSDDSPN

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

62.6

43.3

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

71.6

0.49

0.9

69.9

35.5

Minor 5ss

33.3

-1.9

3.6

47.7

47.8

Minor BPS

44.9

-0.4

1.9

52.89

38.7

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828

ENSAPLT00000048529

18394448 - 18454621

60174