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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18441373_18445736_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18441373 - 18445736

Intron Length:

4364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TCCCCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATGATTAAAT

Flanking Amino Acid:

DLIYGVFTTNVNSIAASAVC

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

66.1

40.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.5

0.75

0.7

75.7

32.8

Minor 5ss

42.5

-0.8

2.8

53.5

43.7

Minor BPS

50.6

0.1

2.1

73.09

42.8

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048529

18394448 - 18454621

60174

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828