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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18446023_18448611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18446023 - 18448611

Intron Length:

2589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAGTCA

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

AATCTCTTCACA

Flanking Amino Acid:

TAQYNSKWLNEPNFIAAYDI

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

64.4

35.9

Major BPS

74.5

0.61

79.6

29.1

Major PPT

87.2

0.84

0.8

84.6

Minor 5ss

36.5

-1.5

3.3

44.6

45.3

Minor BPS

57.7

0.23

1.7

68.22

37.7

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048529

18394448 - 18454621

60174

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828