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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18448822_18449562_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18448822 - 18449562

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTC|GTCAGGTCT

5'SS Class:

weak_major

3'SS Sequence:

TAAATACAGGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTCCTTTTAAAT

Flanking Amino Acid:

TNAFSPVCSSRNLSKIIDRI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.4

0.03

1.5

56.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

49.9

-0

1.1

45.3

41.3

Minor 5ss

36.3

-1.6

3.3

49.4

Minor BPS

58.1

0.33

1.4

69.62

41.7

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048529

18394448 - 18454621

60174