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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18448826_18449557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18448826 - 18449557

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTTTT

5'SS Class:

major

3'SS Sequence:

CTTTTAAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCTCTTTAAAT

Flanking Amino Acid:

AFSPVCSSRQVGNLSKIIDR

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.3

80.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.6

0.6

70.7

38.1

Minor 5ss

47.6

-0.2

2.6

67.4

43.7

Minor BPS

72.5

0.79

1.4

81.87

39.5

Associated Gene:

Gene:

SEMA5B

Ensembl Gene ID:

ENSAPLG00000004815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037293

18402215 - 18499533

97319

ENSAPLT00000004964

18382268 - 18496095

113828