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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1862085_1864322_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1862085 - 1864322

Intron Length:

2238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

ATGCTCTAAAGA

Flanking Amino Acid:

DGWKLVYDSLDPQHENFPAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.6

Major BPS

0.57

73.6

28.6

Major PPT

0.83

0.8

84.6

Minor 5ss

45.7

-0.4

2.5

54.4

45.2

Minor BPS

47.6

-0.1

1.9

58.3

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041897

1862043 - 1883689

21647