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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18717262_18734063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18717262 - 18734063

Intron Length:

16802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TACGAATTAACT

Flanking Amino Acid:

SSVLVMFHAPWCGHCKKMKP

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

76.9

34.5

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

89.2

0.88

0.8

88.3

28.9

Minor 5ss

40.8

-1

53.8

43.6

Minor BPS

52.3

0.15

1.9

71.45

44.8

Associated Gene:

Gene:

PDIA5

Ensembl Gene ID:

ENSAPLG00000005015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005204

18676840 - 18765366

88527