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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1874934_1876610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1874934 - 1876610

Intron Length:

1677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACAGAAC

5'SS Class:

major

3'SS Sequence:

CCTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGAGCAT

U12 Branch Point Sequence:

TGGCTCAGAGCA

Flanking Amino Acid:

QLHIFLDQYTEVPYDALRYM

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.7

0.3

1.1

57.8

41.2

Major BPS

45.8

-0.2

1.4

51.5

43.9

Major PPT

86.5

0.82

0.7

80.3

31.8

Minor 5ss

31.3

-2.1

3.4

42.3

Minor BPS

42.1

-0.6

1.8

51.55

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041897

1862043 - 1883689

21647