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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18781384_18783182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18781384 - 18783182

Intron Length:

1799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TATTTCTAAGTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.2

26.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

86.9

0.83

0.8

84.7

35.8

Minor 5ss

42.2

-0.9

2.8

52.8

38.5

Minor BPS

55.8

0.26

1.9

76.43

40.7

Associated Gene:

Gene:

SEC22A

Ensembl Gene ID:

ENSAPLG00000005344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005541

18781155 - 18793987

12833