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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18800545_18802422_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18800545 - 18802422

Intron Length:
1878

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGAAA

5'SS Class:
strong_major

3'SS Sequence:
GTTTATTTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TCTTGTTTATTT

Flanking Amino Acid:
DSTGVPDRIQVTTDMYQVLA

Intron Amino Acid Position:
1171

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.6
0.98
0.8
84
28.8

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
86.4
0.82
0.8
80.8
36.4

Minor 5ss
31.6
-2.1
3.1
39
46.4

Minor BPS
54.2
0.21
2
74.81
43.2

Associated Gene:

Gene:
ADCY5

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18800416 - 19010473
210058