Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_18814725_18820524_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18814725 - 18820524

Intron Length:

5800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCACACCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

TTTTCTTCCACA

Flanking Amino Acid:

FVSVIYSCVKLFPAPLQTLS

Intron Amino Acid Position:

767

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

79.2

0.72

Major PPT

67.8

0.4

0.9

58.9

36.3

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

61.7

0.36

79.34

37.2

Associated Gene:

Gene:

ADCY5

Ensembl Gene ID:

ENSAPLG00000005419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005654

18800416 - 19010473

210058