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Intron Name: Anas_platyrhynchos_platyrhynchos_7_18842816_18853029_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18842816 - 18853029

Intron Length:
10214

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAAGATCA

5'SS Class:
strong_major

3'SS Sequence:
GTTTGTATTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCAAAT

U12 Branch Point Sequence:
TTCTTCTGCATT

Flanking Amino Acid:
FLIVRCSQKRKDEKATIAKM

Intron Amino Acid Position:
609

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
1
71.4
35.1

Major BPS
77.3
0.68
1
81.5
27

Major PPT
81.5
0.71
0.9
78.1
40.1

Minor 5ss
37.8
-1.4
3
40.6
45.1

Minor BPS
53.5
0.19
1.9
75.82
41.6

Associated Gene:

Gene:
ADCY5

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18800416 - 19010473
210058