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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1887061_1889694_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1887061 - 1889694

Intron Length:

2634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCAGAACT

Flanking Amino Acid:

MFLYVALVDMLPEMLHGDGD

Intron Amino Acid Position:

807

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

68.4

Major BPS

100

1.24

0.5

100

Major PPT

87.3

0.84

0.7

86.5

26.1

Minor 5ss

36.2

-1.6

3.3

43.9

45.7

Minor BPS

67.6

0.63

1.7

89.84

33.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032785

1867236 - 1922106

54871

ENSAPLT00000014290

1886892 - 1943431

56540

ENSAPLT00000035537

1885369 - 1922106

36738