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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1889886_1891403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1889886 - 1891403

Intron Length:

1518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

CAATACTAAACT

Flanking Amino Acid:

VFCHELPHELGDFAVLLKAG

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

1.1

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

78.8

0.65

0.7

76.6

25.5

Minor 5ss

42.9

-0.8

2.7

59.7

44.8

Minor BPS

54.9

0.23

1.9

71.13

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035537

1885369 - 1922106

36738

ENSAPLT00000032785

1867236 - 1922106

54871

ENSAPLT00000014290

1886892 - 1943431

56540