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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1895356_1896642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1895356 - 1896642

Intron Length:

1287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTTACAAATCC

Flanking Amino Acid:

RMYKHYNKQKSQQKWCKKKP

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

74.4

41.9

Major BPS

73.5

0.59

81.3

29.9

Major PPT

85.4

0.8

80.4

31.6

Minor 5ss

47.2

-0.3

2.6

66.5

44.6

Minor BPS

-0.3

2.3

68.38

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035537

1885369 - 1922106

36738

ENSAPLT00000032785

1867236 - 1922106

54871

ENSAPLT00000014290

1886892 - 1943431

56540