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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19023467_19029348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19023467 - 19029348

Intron Length:

5882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TCATATTGAACC

Flanking Amino Acid:

TWAVTHSVKEVQTEDCVLLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

84.9

0.79

0.6

81.1

24.1

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

55.8

0.16

1.6

65.12

40.2

Associated Gene:

Gene:

HACD2

Ensembl Gene ID:

ENSAPLG00000016518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043284

19020220 - 19029396

9177